Selected
Publications
1. R.A. Phelps, S. Chidester, S. Dehghanizadeh, J. Phelps, I.T. Sandoval, K. Rai, T. Broadbent, S. Sarkar, R.W. Burt and D.A. Jones (2009) A two step model for colon adenoma initiation and progression caused by APC loss.
Cell, 137(4): 623-634.
2.K. Rai, I.J. Huggins, R.J. Smitha, A.R. Karpf, D.A. Jones*, B.R. Cairns* (2008)
DNA demethylation in zebrafish involving the couble of a 5-meC deaminase, a G;T glycosylase, and Gadd45.
Cell, 135(7):1201-12. *Co-corresponding authors.
3.A.L. Eisinger, L.D. Nadauld, D.N. Shelton, S.M. Prescott, D.M. Stafforini and D.A. Jones (2007)
Retinoic Acid Suppression of Cyclooxygenase-2 Inhibits beta-Catenin Signaling: A Role for Truncated Adenomatous Polyposis Coli.
Journal of Biological Chemistry, 282(40):29394-400.
4.K. Rai, S. Chidester, C.V. Zvala, E.J. Manos, S.R. James, A.R. Karpf, D.A. Jones* and B.R. Cairns* (2007)
Dnmt2 functions in the cytoplasm to promote liver, brain and retina development in zebrafish.
Genes and Development, 21(3):261-6. *Co-corresponding authors.
5.L.D. Nadauld, B.C. Moore, R. Phelps, I.T. Sandoval, S. Chidester, P.W. Peterson, A. Eisinger, E.J. Manos, B. Sklow, R.W. Burt and D.A. Jones (2006) Adenomatous polyposis coli control of C-terminal binding protein-1 stability regulates expression of intestinal retinol dehydrogenases.
Journal of Biological Chemistry, 281(49):37828-35.
6.L.D. Nadauld, S. Chidester, D.N. Shelton, I.T. Sandoval, P.W. Peterson,
E.J. Manos, C.M. Ireland, H.J. Yost and D.A. Jones (2006)
Dual roles for adenomatous polyposis coli in regulating retinoic acid biosynthesis and Wnt during ocular development. Proceeding of the National Academy of Sciences, 103(36):13409-13414.
7. K. Rai, L.D. Nadauld, S. Chidester, E.J. Manos, S.R. James, A.R. Karpf,
B.R. Cairns and D.A. Jones (2006) Zebrafish dnmt1 and
suv39h1 regulate organ-specific terminal differentiation during development.
Molecular and Cellular Biology, 26(19):7077-7085. *Co-corresponding authors.
8. A.L. Eisinger, L.D. Nadauld, D.N. Shelton, P.W. Peterson, R.A. Phelps,
S. Chidester, D.M. Stafforini, S.M. Prescott and D.A. Jones
(2006) The APC tumor suppressor gene regulates expression of cyclooxygenase-2
by a mechanism that involves retinoic acid. Journal of Biological
Chemistry, 281(29):20474-20482.
9. D.N. Shelton, I.T. Sandoval, A.L. Eisinger, S.Chidester, A. Ratnayake,
C.M. Ireland and D.A. Jones (2006) Upregulation of CYP26A1
in APC-deficient vertebrates via a WNT-dependent mechanism: implications
for intestinal cell differentiation and colon tumor development. Cancer
Research, 66(15):7571-7577.
10. L. D. Nadauld, D. Shelton, S. Chidester, H.J. Yost and D.A.
Jones (2005) The zebrafish retinol dehydrogenase, rdh1l, is essential
for intestinal development and is regulated by the tumor suppressor adenomatous
polyposis coli. Journal of Biological Chemistry, 280(34), 30490-30495.
11. W.E. Samlowski, S.A. Leachman, M. Wade, P. Cassidy, P. Porter-Gill,
L. Busby, R. Wheeler, K. Boucher, F. Fitzpatrick, D.A. Jones
and A.R. Karpf (2005) Evaluation of a 7-day Continuous Intravenous Infusion
of Decitabine (5-aza-2’-deoxycytidine): Inhibition of promoter-specific
and global genomic DNA methylation. Journal of Clinical Oncology,
23(17):3897-3905.
12. L. D. Nadauld, I.T. Sandoval, S. Chidester, H.J. Yost and D.A.
Jones (2004) Adenomatous polyposis coli control of retinoic acid
biosynthesis is critical for zebrafish intestinal development and differentiation.
Journal of Biological Chemistry, 279(49):51581-51589.
13. C. Jette, P.W. Peterson, I.T. Sandoval, E.J. Manos, E. Hadley, C.M.
Ireland and D.A. Jones (2004) The tumor suppressor adenomatous
polyposis coli and the caudal related homeodomain protein regulate expression
of retinol dehydrogenase, L. Journal of Biological Chemistry
279(33):34397-34405.
14. A.R. Karpf, A. Lasek, T.O.Ririe, A. N. Hanks, D. Grossman and D.A.
Jones (2004) Limited gene activation in tumor and normal epithelial
cell lines treated with the DNA methyltransferase inhibitor 5-aza-2¢-deoxycytidine.
Molecular Pharmacology, 65:18-27.
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